Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein pilm | PPUTUW4_RS01755 | G3XD28 | Positive | 383987 - 385051 | 37770.8 |
| piln domain-containing protein | PPUTUW4_RS01760 | G3XD30 | Positive | 385051 - 385617 | 21231.6 |
| type 4a pilus biogenesis protein pilo | PPUTUW4_RS01765 | G3XD51 | Positive | 385614 - 386237 | 23082.0 |
| pilus assembly protein pilp | PPUTUW4_RS01770 | G3XCX7 | Positive | 386234 - 386761 | 19122.7 |
| type iv pilus secretin pilq | PPUTUW4_RS01775 | P34750 | Positive | 386775 - 388838 | 74042.5 |
| shikimate kinase arok | PPUTUW4_RS01780 | Q4KJI9 | Positive | 388843 - 389361 | 19317.5 |
| 3-dehydroquinate synthase | PPUTUW4_RS01785 | Q3KJA1 | Positive | 389512 - 390612 | 39981.3 |
| aaa family atpase | PPUTUW4_RS01790 | Not Available | Positive | 390623 - 392224 | 55519.4 |
| glutamate synthase large subunit | PPUTUW4_RS01795 | E1V8I1 | Positive | 392573 - 397018 | 162232.0 |
| fad-dependent oxidoreductase | PPUTUW4_RS01800 | E1V8I0 | Positive | 397051 - 398469 | 51922.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




