Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-butyrobetaine hydroxylase-like domain-containing protein | PPUTUW4_RS01705 | Not Available | Negative | 370680 - 371057 | 14072.8 |
| hslu--hslv peptidase atpase subunit | PPUTUW4_RS01710 | Q3KJB6 | Negative | 371213 - 372550 | 49714.0 |
| atp-dependent protease subunit hslv | PPUTUW4_RS01715 | Q4KJK2 | Negative | 372605 - 373135 | 18712.4 |
| spor domain-containing protein | PPUTUW4_RS01720 | Not Available | Negative | 373383 - 374090 | 25340.8 |
| arginine--trna ligase | PPUTUW4_RS01725 | Q3KJB3 | Negative | 374092 - 375828 | 63700.4 |
| primosomal protein n' | PPUTUW4_RS01730 | P17888 | Negative | 376065 - 378284 | 82084.5 |
| 50s ribosomal protein l31 | PPUTUW4_RS01735 | Q3KJB1 | Positive | 378574 - 378792 | 7832.34 |
| thermonuclease family protein | PPUTUW4_RS01740 | Not Available | Positive | 378828 - 379616 | 28090.0 |
| malic enzyme-like nad(p)-binding protein | PPUTUW4_RS01745 | E1V8J1 | Positive | 379800 - 381068 | 45054.4 |
| penicillin-binding protein 1a | PPUTUW4_RS01750 | Q07806 | Negative | 381332 - 383773 | 88537.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




