Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine betaine/l-proline abc transporter atp-binding protein | PPUTUW4_RS01550 | P46920 | Positive | 337141 - 337971 | 30559.3 |
| histidine ammonia-lyase | PPUTUW4_RS01555 | Q67JH4 | Positive | 338104 - 339627 | 54011.2 |
| histidine ammonia-lyase | PPUTUW4_RS01560 | Q3KJE6 | Positive | 339747 - 341279 | 54164.3 |
| amino acid permease | PPUTUW4_RS01565 | P37460 | Positive | 341389 - 342798 | 50170.9 |
| imidazolonepropionase | PPUTUW4_RS01570 | Q3KJE5 | Positive | 342816 - 344021 | 43014.5 |
| n-formylglutamate deformylase | PPUTUW4_RS01575 | O31201 | Positive | 344032 - 344835 | 29937.6 |
| choline abc transporter substrate-binding protein | PPUTUW4_RS01580 | Not Available | Positive | 345099 - 346046 | 34331.3 |
| alpha/beta hydrolase | PPUTUW4_RS01585 | P71668 | Positive | 346201 - 347106 | 32319.6 |
| prolyl aminopeptidase | PPUTUW4_RS01590 | Q9PD69 | Positive | 347211 - 348182 | 36491.2 |
| d-aminoacyl-trna deacylase | PPUTUW4_RS01595 | Q3KJE0 | Positive | 348179 - 348616 | 15293.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




