Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | PPUTUW4_RS01500 | Q882Z2 | Negative | 325292 - 327184 | 67117.9 |
| hypothetical protein | PPUTUW4_RS01505 | Not Available | Positive | 327470 - 327724 | 8799.74 |
| lipocalin family protein | PPUTUW4_RS01510 | Q9FGT8 | Positive | 327755 - 328324 | 21526.8 |
| formimidoylglutamate deiminase | PPUTUW4_RS01515 | Q9HU77 | Negative | 328438 - 329802 | 49799.0 |
| histidine utilization repressor | PPUTUW4_RS01520 | P22773 | Positive | 329949 - 330659 | 26613.9 |
| hutd family protein | PPUTUW4_RS01525 | P24696 | Positive | 330670 - 331242 | 20592.5 |
| methyl-accepting chemotaxis protein | PPUTUW4_RS01530 | Not Available | Negative | 331249 - 332886 | 59299.3 |
| urocanate hydratase | PPUTUW4_RS01535 | C3K803 | Positive | 333338 - 335020 | 61148.0 |
| abc transporter substrate-binding protein | PPUTUW4_RS01540 | Not Available | Positive | 335254 - 336222 | 35264.3 |
| proline/glycine betaine abc transporter permease | PPUTUW4_RS01545 | P14176 | Positive | 336293 - 337144 | 30658.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




