Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s41 family peptidase | PPUTUW4_RS01400 | Q44879 | Negative | 299054 - 300370 | 46329.6 |
| murein hydrolase activator envc | PPUTUW4_RS01405 | P37690 | Negative | 300402 - 301697 | 47917.9 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | PPUTUW4_RS01410 | Q3KJH9 | Negative | 301949 - 303478 | 55123.4 |
| rhodanese-like domain-containing protein | PPUTUW4_RS01415 | Not Available | Positive | 303631 - 304044 | 14506.0 |
| glutaredoxin 3 | PPUTUW4_RS01420 | Q9HU55 | Positive | 304046 - 304300 | 9096.92 |
| protein-export chaperone secb | PPUTUW4_RS01425 | Q3KJH6 | Positive | 304357 - 304842 | 17910.2 |
| trna (cytidine(34)-2'-o)-methyltransferase | PPUTUW4_RS01430 | Q0BBL1 | Negative | 304975 - 305430 | 17000.3 |
| hypothetical protein | PPUTUW4_RS01435 | Not Available | Positive | 305429 - 305869 | 15893.2 |
| nitrogen regulation protein nr(i) | PPUTUW4_RS01440 | P41789 | Negative | 306406 - 307842 | 53113.4 |
| nitrogen regulation protein nr(ii) | PPUTUW4_RS01445 | P19906 | Negative | 307839 - 308924 | 40170.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




