Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asma family protein | PPUTUW4_RS01350 | Not Available | Negative | 289355 - 291586 | 80186.3 |
| aspartate 1-decarboxylase autocleavage activator panm | PPUTUW4_RS01355 | Not Available | Negative | 291665 - 292069 | 14964.3 |
| ofa family mfs transporter | PPUTUW4_RS01360 | A0LNN5 | Positive | 292300 - 293964 | 58956.9 |
| imidazoleglycerol-phosphate dehydratase hisb | PPUTUW4_RS01365 | C3K6U9 | Positive | 294248 - 294841 | 21926.3 |
| imidazole glycerol phosphate synthase subunit hish | PPUTUW4_RS01370 | Q3KJI8 | Positive | 294841 - 295479 | 23372.9 |
| duf2164 domain-containing protein | PPUTUW4_RS01375 | Not Available | Positive | 295480 - 295737 | 10084.0 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | PPUTUW4_RS01380 | C3K6V2 | Positive | 295780 - 296517 | 25698.1 |
| imidazole glycerol phosphate synthase subunit hisf | PPUTUW4_RS01385 | Q3KJI5 | Positive | 296527 - 297297 | 27269.7 |
| abc transporter substrate-binding protein | PPUTUW4_RS01390 | Not Available | Positive | 297376 - 298131 | 28252.3 |
| divergent polysaccharide deacetylase family protein | PPUTUW4_RS01395 | P44863 | Negative | 298275 - 299051 | 28471.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




