Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 273460 - 273535 | Not Available |
| fkbm family methyltransferase | PPUTUW4_RS01255 | Not Available | Negative | 273614 - 274438 | 31218.8 |
| methyltransferase | PPUTUW4_RS01260 | Not Available | Negative | 274782 - 276011 | 45323.5 |
| abc transporter permease | PPUTUW4_RS01265 | P35114 | Negative | 275992 - 276681 | 25656.3 |
| abc transporter permease | PPUTUW4_RS01270 | P72295 | Negative | 276678 - 277373 | 25064.8 |
| abc transporter substrate-binding protein | PPUTUW4_RS01275 | G3XD47 | Negative | 277446 - 278195 | 27743.0 |
| abc transporter atp-binding protein | PPUTUW4_RS01280 | Not Available | Negative | 278209 - 278982 | 28146.1 |
| gaba permease | PPUTUW4_RS01285 | Q9I703 | Positive | 279547 - 280938 | 49637.8 |
| trna(fmet)-specific endonuclease vapc | PPUTUW4_RS01290 | Q8ZM86 | Negative | 281009 - 281416 | 15091.4 |
| type ii toxin-antitoxin system vapb family antitoxin | PPUTUW4_RS01295 | P18355 | Negative | 281416 - 281646 | 8568.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




