Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatine deiminase | PPUTUW4_RS01200 | C3K5U8 | Positive | 264429 - 265535 | 40703.9 |
| hypothetical protein | PPUTUW4_RS01205 | Not Available | Positive | 265780 - 265992 | 7908.38 |
| tonb-dependent siderophore receptor | PPUTUW4_RS01210 | A0A0H2ZI93 | Negative | 266171 - 268264 | 76949.3 |
| dsba family protein | PPUTUW4_RS01215 | Not Available | Positive | 268528 - 269199 | 24023.9 |
| oprd family porin | PPUTUW4_RS01220 | P32722 | Positive | 269460 - 270746 | 46863.3 |
| hypothetical protein | PPUTUW4_RS01225 | Q9KMA6 | Positive | 270955 - 271272 | 11871.2 |
| dna-binding transcriptional regulator | PPUTUW4_RS01230 | Not Available | Positive | 271262 - 271546 | 10238.3 |
| 4-oxalocrotonate tautomerase family protein | PPUTUW4_RS01235 | P45418 | Positive | 271766 - 271987 | 8276.79 |
| dsba family oxidoreductase | PPUTUW4_RS01240 | Not Available | Positive | 271984 - 272640 | 23903.4 |
| sdr family nad(p)-dependent oxidoreductase | PPUTUW4_RS01245 | Q9X248 | Positive | 272685 - 273395 | 24885.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




