Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PPUTUW4_RS01150 | P0ACQ6 | Negative | 252880 - 253767 | 32843.7 |
| peptidoglycan-binding protein lysm | PPUTUW4_RS01155 | P0ADE7 | Positive | 253896 - 254336 | 15487.6 |
| gmp/imp nucleotidase | PPUTUW4_RS01160 | P64636 | Negative | 254466 - 255128 | 25175.1 |
| adp compounds hydrolase nude | PPUTUW4_RS01165 | Not Available | Positive | 255217 - 255783 | 20895.1 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | PPUTUW4_RS01170 | Q8FAG5 | Positive | 255780 - 256607 | 29083.7 |
| yiid c-terminal domain-containing protein | PPUTUW4_RS01175 | Not Available | Negative | 256748 - 257203 | 17304.8 |
| sigma-54 dependent transcriptional regulator | PPUTUW4_RS01180 | Not Available | Negative | 257245 - 258639 | 50563.8 |
| atp-binding protein | PPUTUW4_RS01185 | Q9HU20 | Negative | 258636 - 260444 | 66643.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | PPUTUW4_RS01190 | Q9HU21 | Negative | 260538 - 261083 | 20460.1 |
| aminotransferase | PPUTUW4_RS01195 | Q7SY54 | Positive | 261241 - 264153 | 105673.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




