Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | PPUTUW4_RS01100 | Not Available | Negative | 241268 - 241762 | 17647.4 |
| hypothetical protein | PPUTUW4_RS01105 | Not Available | Negative | 241970 - 242269 | 11296.5 |
| hypothetical protein | PPUTUW4_RS01110 | Not Available | Negative | 242623 - 242961 | 12489.9 |
| s8 family peptidase | PPUTUW4_RS01115 | P09489 | Negative | 243356 - 244420 | 37532.3 |
| atp-dependent dna helicase recq | PPUTUW4_RS01120 | O34748 | Positive | 244684 - 246618 | 72476.6 |
| 3-hydroxyacyl-coa dehydrogenase | PPUTUW4_RS01125 | Q6NYL3 | Positive | 246851 - 248077 | 44451.4 |
| thioesterase family protein | PPUTUW4_RS01130 | Not Available | Positive | 248254 - 248676 | 15514.2 |
| glycine zipper domain-containing protein | PPUTUW4_RS01135 | Not Available | Negative | 248741 - 249232 | 15888.4 |
| fdhf/ydep family oxidoreductase | PPUTUW4_RS01140 | P9WJP8 | Negative | 249588 - 251936 | 86284.5 |
| formate dehydrogenase accessory sulfurtransferase fdhd | PPUTUW4_RS01145 | Q7WMS0 | Negative | 251933 - 252787 | 30308.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




