Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tex family protein | PPUTUW4_RS01050 | P46837 | Negative | 229709 - 232033 | 84680.4 |
| two-component system response regulator ompr | PPUTUW4_RS01055 | P0AA18 | Positive | 232395 - 233135 | 27460.2 |
| atp-binding protein | PPUTUW4_RS01060 | A0A0H3NIL4 | Positive | 233251 - 234564 | 48925.2 |
| 30s ribosomal protein s6--l-glutamate ligase | PPUTUW4_RS01065 | Q3KJQ0 | Negative | 234733 - 235638 | 32497.0 |
| atp-dependent zinc protease | PPUTUW4_RS01070 | Q6AKK4 | Negative | 235635 - 236054 | 15321.7 |
| rna-binding s4 domain-containing protein | PPUTUW4_RS01075 | P44754 | Positive | 236331 - 236735 | 15012.9 |
| hsp33 family molecular chaperone hslo | PPUTUW4_RS01080 | Q4KK04 | Positive | 236964 - 237866 | 33388.5 |
| phosphoenolpyruvate carboxykinase | PPUTUW4_RS01085 | Q3KJP4 | Positive | 238047 - 239588 | 55447.6 |
| duf1493 family protein | PPUTUW4_RS01090 | Not Available | Negative | 239644 - 239997 | 13460.1 |
| type ii toxin-antitoxin system hipa family toxin | PPUTUW4_RS01095 | Not Available | Negative | 239994 - 241271 | 47794.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




