Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilz domain-containing protein | PPUTUW4_RS00055 | Not Available | Positive | 13017 - 13256 | 8745.7 |
| tetratricopeptide repeat protein | PPUTUW4_RS00060 | Q9I7B1 | Negative | 13247 - 13564 | 11803.2 |
| trk system potassium transporter trka | PPUTUW4_RS00065 | E1V6C6 | Negative | 13725 - 15101 | 50090.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | PPUTUW4_RS00070 | Q88RR3 | Negative | 15124 - 16434 | 47369.1 |
| methionyl-trna formyltransferase | PPUTUW4_RS00075 | Q3KKE6 | Negative | 16431 - 17390 | 33863.9 |
| peptide deformylase | PPUTUW4_RS00080 | A4VFH8 | Negative | 17448 - 17954 | 19303.3 |
| hypothetical protein | PPUTUW4_RS00085 | Not Available | Positive | 18142 - 18966 | 29751.8 |
| dna-processing protein dpra | PPUTUW4_RS00090 | P30852 | Positive | 19048 - 20154 | 38789.8 |
| l-threonylcarbamoyladenylate synthase | PPUTUW4_RS00095 | Q3KKE2 | Positive | 20209 - 20766 | 20628.8 |
| nadph:quinone reductase | PPUTUW4_RS00100 | P43903 | Negative | 20865 - 21842 | 34342.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




