Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid desaturase | PPUTUW4_RS00850 | Not Available | Positive | 182764 - 183837 | 40647.8 |
| arylsulfatase | PPUTUW4_RS00855 | P51691 | Negative | 183968 - 185578 | 59898.9 |
| abc transporter atp-binding protein | PPUTUW4_RS00860 | Q63A38 | Negative | 185594 - 186409 | 30021.3 |
| abc transporter permease | PPUTUW4_RS00865 | P40401 | Negative | 186406 - 188004 | 58267.4 |
| abc transporter substrate-binding protein | PPUTUW4_RS00870 | P40400 | Positive | 188407 - 189420 | 35362.6 |
| lysr family transcriptional regulator | PPUTUW4_RS00875 | Not Available | Negative | 189543 - 190463 | 33861.9 |
| taud/tfda family dioxygenase | PPUTUW4_RS00880 | Q9WWU5 | Positive | 190647 - 191567 | 33801.9 |
| tonb-dependent receptor | PPUTUW4_RS00885 | P46359 | Positive | 191702 - 194062 | 85345.6 |
| energy transducer tonb | PPUTUW4_RS00890 | Q9RMT3 | Positive | 194322 - 195131 | 28625.0 |
| mota/tolq/exbb proton channel family protein | PPUTUW4_RS00895 | P64099 | Positive | 195176 - 195901 | 25582.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




