Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfur starvation response protein osca | PPUTUW4_RS00800 | Not Available | Positive | 174501 - 174683 | 6733.05 |
| sulfate abc transporter substrate-binding protein | PPUTUW4_RS00805 | P0AG78 | Positive | 174797 - 175810 | 36843.5 |
| sulfate abc transporter permease subunit cyst | PPUTUW4_RS00810 | P41032 | Positive | 175992 - 176810 | 29308.2 |
| sulfate abc transporter permease subunit cysw | PPUTUW4_RS00815 | P0AEB1 | Positive | 176823 - 177692 | 31382.0 |
| sulfate/molybdate abc transporter atp-binding protein | PPUTUW4_RS00820 | Q88AS5 | Positive | 177696 - 178685 | 37030.3 |
| duf962 domain-containing protein | PPUTUW4_RS00825 | Not Available | Negative | 178775 - 179299 | 19043.7 |
| crp/fnr family transcriptional regulator | PPUTUW4_RS00830 | Not Available | Positive | 179383 - 180069 | 25535.5 |
| helix-turn-helix domain-containing protein | PPUTUW4_RS00835 | Not Available | Positive | 180185 - 180433 | 9259.26 |
| type ii toxin-antitoxin system hipa family toxin | PPUTUW4_RS00840 | Not Available | Positive | 180426 - 181658 | 44899.6 |
| arac family transcriptional regulator | PPUTUW4_RS00845 | P72171 | Negative | 181659 - 182663 | 37857.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




