Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m48 family metalloprotease | PPUTUW4_RS00750 | Not Available | Positive | 160809 - 162170 | 49810.5 |
| duf3077 domain-containing protein | PPUTUW4_RS00755 | Not Available | Negative | 162530 - 162805 | 9875.81 |
| Trna-arg | Not Available | Not Available | Positive | 163620 - 163696 | Not Available |
| nadp-dependent succinate-semialdehyde dehydrogenase | PPUTUW4_RS00765 | Q88RC0 | Positive | 164045 - 165487 | 51456.8 |
| 4-aminobutyrate--2-oxoglutarate transaminase | PPUTUW4_RS00770 | Q88RB9 | Positive | 165674 - 166951 | 44796.5 |
| response regulator | PPUTUW4_RS00775 | Not Available | Positive | 167088 - 168302 | 44639.3 |
| is3 family transposase | PPUTUW4_RS00780 | Not Available | Positive | 168404 - 169540 | 43293.2 |
| sensor domain-containing diguanylate cyclase | PPUTUW4_RS00785 | A0A0H3AFM6 | Negative | 169676 - 170665 | 37198.7 |
| delta-9 fatty acid desaturase desa | PPUTUW4_RS00790 | Not Available | Negative | 170943 - 172127 | 45240.1 |
| phosphodiesterase diba | PPUTUW4_RS00795 | Not Available | Positive | 172274 - 174214 | 72083.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




