Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1656 domain-containing protein | PPUTUW4_RS00700 | Not Available | Positive | 151221 - 151430 | 7839.0 |
| hlyd family secretion protein | PPUTUW4_RS00705 | Not Available | Positive | 151427 - 152314 | 32903.4 |
| efflux transporter outer membrane subunit | PPUTUW4_RS00710 | Not Available | Positive | 152311 - 153759 | 51198.4 |
| hypothetical protein | PPUTUW4_RS00715 | Not Available | Positive | 153853 - 154488 | 24127.1 |
| ydga family protein | PPUTUW4_RS00720 | P77804 | Positive | 154745 - 156250 | 53655.3 |
| apoptosis inducing factor family protein | PPUTUW4_RS00725 | Q10499 | Negative | 156322 - 157851 | 55494.2 |
| ybhb/ybcl family raf kinase inhibitor-like protein | PPUTUW4_RS00730 | Not Available | Positive | 157991 - 158551 | 19550.1 |
| hypothetical protein | PPUTUW4_RS29875 | Not Available | Positive | 158595 - 158864 | 10331.5 |
| chase2 domain-containing protein | PPUTUW4_RS00740 | Not Available | Positive | 159081 - 160493 | 51086.0 |
| hypothetical protein | PPUTUW4_RS00745 | Not Available | Positive | 160453 - 160818 | 12843.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




