Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase | PPUTUW4_RS27685 | Not Available | Negative | 120836 - 130778 | 362022.0 |
| tolc family outer membrane protein | PPUTUW4_RS00605 | P02930 | Positive | 131135 - 132487 | 49846.6 |
| type i secretion system permease/atpase | PPUTUW4_RS00610 | P23702 | Positive | 132530 - 134686 | 78867.9 |
| hlyd family type i secretion periplasmic adaptor subunit | PPUTUW4_RS00615 | Q7ANN5 | Positive | 134676 - 136040 | 50563.1 |
| taud/tfda family dioxygenase | PPUTUW4_RS00620 | Not Available | Positive | 136426 - 137313 | 33211.4 |
| abc transporter substrate-binding protein | PPUTUW4_RS00625 | Not Available | Positive | 137332 - 138357 | 37184.3 |
| abc transporter atp-binding protein | PPUTUW4_RS00630 | Q2K164 | Positive | 138363 - 139223 | 31956.7 |
| abc transporter permease | PPUTUW4_RS00635 | Not Available | Positive | 139245 - 140111 | 31792.8 |
| lysr family transcriptional regulator | PPUTUW4_RS00640 | Not Available | Positive | 140220 - 141137 | 34012.2 |
| mfs transporter | PPUTUW4_RS00645 | Q9RQ29 | Positive | 141353 - 142885 | 54841.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




