Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 111171 - 112706 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 112787 - 112863 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 112894 - 112969 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 113217 - 116110 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 116281 - 116396 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 116506 - 116621 | Not Available |
| gntr family transcriptional regulator | PPUTUW4_RS00580 | O05494 | Negative | 116746 - 117456 | 26565.0 |
| cysteine protease lapg | PPUTUW4_RS00585 | Not Available | Positive | 117652 - 118344 | 26142.4 |
| cyclic di-gmp receptor lapd | PPUTUW4_RS00590 | Not Available | Positive | 118359 - 120305 | 71907.7 |
| hypothetical protein | PPUTUW4_RS00595 | Not Available | Negative | 120351 - 120689 | 12421.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




