Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2388 domain-containing protein | PPUTUW4_RS00500 | Not Available | Negative | 100581 - 100901 | 10927.0 |
| duf1127 domain-containing protein | PPUTUW4_RS00505 | Not Available | Negative | 101047 - 101256 | 7911.51 |
| duf1127 domain-containing protein | PPUTUW4_RS00510 | Not Available | Negative | 101516 - 101731 | 8306.97 |
| acetyl-coa hydrolase/transferase family protein | PPUTUW4_RS00515 | P38946 | Negative | 102052 - 103545 | 53860.9 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | PPUTUW4_RS00520 | Q2RSB4 | Negative | 103759 - 105192 | 49957.1 |
| nad(p) transhydrogenase subunit alpha | PPUTUW4_RS00525 | Q2RSB3 | Negative | 105189 - 105545 | 12419.8 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | PPUTUW4_RS00530 | Q2RSB2 | Negative | 105557 - 106678 | 38681.9 |
| lysr family transcriptional regulator | PPUTUW4_RS00535 | Not Available | Negative | 107114 - 108013 | 33938.7 |
| acyl-coa dehydrogenase | PPUTUW4_RS00540 | Q54R47 | Positive | 108171 - 109352 | 43154.9 |
| caib/baif coa-transferase family protein | PPUTUW4_RS00545 | Q7CXU0 | Positive | 109366 - 110586 | 43422.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




