Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pr6pr family membrane protein | PPUTUW4_RS05085 | Not Available | Positive | 1172874 - 1173515 | 24381.3 |
| siderophore-interacting protein | PPUTUW4_RS05090 | A5F660 | Negative | 1173707 - 1174492 | 29166.1 |
| padr family transcriptional regulator | PPUTUW4_RS05095 | P64588 | Negative | 1174489 - 1175064 | 21165.0 |
| cs1 type fimbrial major subunit | PPUTUW4_RS05100 | Not Available | Positive | 1175584 - 1176060 | 16723.0 |
| cs1-pili formation c-terminal domain-containing protein | PPUTUW4_RS05105 | Not Available | Positive | 1176171 - 1178693 | 91520.8 |
| hypothetical protein | PPUTUW4_RS05110 | Not Available | Positive | 1178694 - 1179947 | 46525.2 |
| pilus assembly protein | PPUTUW4_RS05115 | Not Available | Positive | 1180007 - 1180750 | 27535.5 |
| cs1 type fimbrial major subunit | PPUTUW4_RS05120 | Not Available | Positive | 1180814 - 1181308 | 18186.7 |
| hypothetical protein | PPUTUW4_RS05125 | Not Available | Positive | 1181345 - 1182598 | 46076.8 |
| dermonecrotic toxin domain-containing protein | PPUTUW4_RS05130 | Not Available | Negative | 1182662 - 1187314 | 174536.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




