Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxine 5'-phosphate synthase | PPUTUW4_RS04935 | Q4KHS8 | Positive | 1132119 - 1132865 | 26831.3 |
| membrane-bound lytic murein transglycosylase mltf | PPUTUW4_RS04940 | Q3KHL5 | Negative | 1132990 - 1134450 | 54870.6 |
| phosphoribosylformylglycinamidine synthase | PPUTUW4_RS04945 | Q3KHL4 | Positive | 1134736 - 1138632 | 140530.0 |
| yqfo family protein | PPUTUW4_RS04950 | Not Available | Positive | 1138638 - 1138949 | 11543.7 |
| n-acetylglucosamine-specific pts transporter subunit iibc | PPUTUW4_RS04955 | P09323 | Negative | 1139136 - 1140851 | 60502.9 |
| phosphoenolpyruvate--protein phosphotransferase | PPUTUW4_RS04960 | P45597 | Negative | 1140892 - 1143408 | 88995.1 |
| sis domain-containing protein | PPUTUW4_RS04965 | Q9WXZ5 | Negative | 1143565 - 1144587 | 36412.9 |
| n-acetylglucosamine-6-phosphate deacetylase | PPUTUW4_RS04970 | Q8XAC3 | Negative | 1144568 - 1145674 | 39348.4 |
| gntr family transcriptional regulator | PPUTUW4_RS04975 | P0ACM7 | Negative | 1145710 - 1146441 | 27235.9 |
| murein l,d-transpeptidase family protein | PPUTUW4_RS04980 | Not Available | Negative | 1146897 - 1147400 | 18995.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




