Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas sp. UW4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere of common reeds |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Brassica napus, Medicago lupulina |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1236535 bp
Thymine Count
1233428 bp
Guanine Count
1854724 bp
Cytosine Count
1858701 bp
Genome Length
6183388 bp
Protein-coding Genes
5507 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class flavin-dependent oxidoreductase | PPUTUW4_RS00450 | O32254 | Positive | 92542 - 93543 | 36742.1 |
| duf1161 domain-containing protein | PPUTUW4_RS00455 | Not Available | Negative | 93611 - 93835 | 7556.42 |
| dodecin | PPUTUW4_RS00460 | Not Available | Negative | 93957 - 94172 | 7943.33 |
| yqjd family protein | PPUTUW4_RS00465 | Not Available | Positive | 94330 - 94653 | 11730.9 |
| lysr family transcriptional regulator | PPUTUW4_RS00470 | P34818 | Negative | 94650 - 95543 | 32658.2 |
| tryptophan synthase subunit beta | PPUTUW4_RS00475 | Q3KK59 | Positive | 95668 - 96888 | 44244.0 |
| tryptophan synthase subunit alpha | PPUTUW4_RS00480 | Q3KK58 | Positive | 96888 - 97700 | 28514.2 |
| duf4105 domain-containing protein | PPUTUW4_RS00485 | Not Available | Negative | 97849 - 99810 | 73957.1 |
| duf2388 domain-containing protein | PPUTUW4_RS00490 | Not Available | Negative | 99807 - 100127 | 11385.5 |
| duf2388 domain-containing protein | PPUTUW4_RS00495 | Not Available | Negative | 100156 - 100473 | 11223.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.




