Methanobacterium formicicum DSM 3637

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanobacteria

Order

Methanobacteriales

Family

Methanobacteriaceae

Genus

Methanobacterium

Description

Methanobacterium formicicum DSM 3637 is a species of methanogenic archaea belonging to the Methanobacterium genus. One of its notable traits is the presence of flagella, which are structures that may aid in motility. This characteristic is significant for its ecological niche, as motility can facilitate the organism's movement towards substrates that are conducive to its growth and metabolic processes. Methanobacterium formicicum DSM 3637 possesses a single replicon, indicating a streamlined genomic organization. This trait is typical of many archaeal species, suggesting a level of genetic efficiency that may be advantageous for survival in various environments. The sequence data for this organism is available under the accession number AMPO00000000.1, providing a reference for researchers interested in studying its genetic makeup and functional capabilities further. In ecological terms, methanogens like Methanobacterium formicicum play a crucial role in anaerobic digestion and the carbon cycle. They contribute to methane production, a significant greenhouse gas, during the breakdown of organic matter in environments such as wetlands and the digestive systems of ruminants. Understanding the traits of Methanobacterium formicicum DSM 3637 can provide insights into its ecological roles and the broader implications of methanogenic activity in various ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanobacteria
OrderMethanobacteriales
FamilyMethanobacteriaceae
GenusMethanobacterium
SpeciesMethanobacterium formicicum
StrainDSM 3637

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanobacterium formicicum DSM 3637 Contig28, whole genome

Gene Summary

Adenine Count

820862 bp

Thymine Count

842828 bp

Guanine Count

510441 bp

Cytosine Count

510136 bp

Genome Length

2684267 bp

Protein-coding Genes

2519 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4fe-4s ferredoxinA994_01855Not AvailablePositive396483 - 39758640166.0
hypothetical proteinA994_01860Not AvailablePositive397981 - 39851118867.5
hypothetical proteinA994_01865Not AvailablePositive398647 - 39926423405.2
haloacid dehalogenase domain-containing protein hydrolaseA994_01870Not AvailableNegative399505 - 40029329205.7
lysine exporter protein lyse/yggaA994_01875Not AvailableNegative400410 - 40104222709.6
hypothetical proteinA994_01880Not AvailableNegative401340 - 4015046616.89
alanine dehydrogenaseA994_01885Not AvailableNegative401607 - 40259035587.9
hypothetical proteinA994_01890Not AvailablePositive402857 - 40363930237.0
protein disulfide isomeraseA994_01895Not AvailablePositive403854 - 40448923574.8
aspartyl/glutamyl-trna amidotransferase subunit aA994_01900Not AvailablePositive404823 - 40625051927.9

Displaying genes 381 – 390 of 2567 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0002909O-acetyl-L-homoserineC6H11NO4Chemical structure of O-acetyl-L-homoserine7540-67-2
Average161.1558Da
Monoisotopic161.0688078Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.