Lacticaseibacillus rhamnosus LRHMDP2

Gram-positiveRodNon-motileFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Lactobacillaceae

Genus

Lacticaseibacillus

Description

Lacticaseibacillus rhamnosus LRHMDP2 is a Gram-positive, rod-shaped bacterium classified as a facultative anaerobe, which allows it to thrive in both aerobic and anaerobic environments. This organism is characterized by its mesophilic nature, with an optimal growth temperature of 37°C, making it well-suited for environments that support human-associated microbiota. L. rhamnosus LRHMDP2 is non-motile and does not possess flagella, indicating that it relies on passive movement through its habitat rather than active propulsion. It has a single replicon and a single membrane, which are typical features of many lactic acid bacteria. As a free-living organism, it can inhabit multiple environments, suggesting a versatile ecological role. The presence of Lacticaseibacillus rhamnosus in diverse habitats highlights its adaptability and potential benefits within microbial communities. Its survival in various conditions may contribute to its functionality in fermentation processes and its possible use in probiotic applications. Understanding its ecological role could provide insights into its interactions within microbiomes and its contributions to health and disease management. The accession number for this bacterium is AMQW00000000.1, which can be used to access genomic information for further research.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyLactobacillaceae
GenusLacticaseibacillus
SpeciesLacticaseibacillus rhamnosus
StrainLRHMDP2

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Lacticaseibacillus rhamnosus LRHMDP2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lacticaseibacillus rhamnosus LRHMDP2 contig00056, whole genome

Gene Summary

Adenine Count

776135 bp

Thymine Count

779271 bp

Guanine Count

683440 bp

Cytosine Count

672264 bp

Genome Length

2911110 bp

Protein-coding Genes

2853 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonucleotide reductase of class iii (anaerobic), activating proteinLRHMDP2_981Q8Z138Negative1014551 - 101513222194.6
hypothetical proteinLRHMDP2_982Not AvailableNegative1015169 - 10152854623.65
lead, cadmium, zinc and mercury transporting atpase / copper-translocating p-type atpaseLRHMDP2_983Q69HU0Negative1015350 - 101757579587.3
negative transcriptional regulator-copper transport operonLRHMDP2_984Q47839Negative1017562 - 101800816207.8
phosphoribosylamine--glycine ligaseLRHMDP2_985Q88U30Negative1018222 - 101946644349.6
topoisomerase iv subunit aLRHMDP2_986Q45066Negative1019786 - 102222790768.0
topoisomerase iv subunit bLRHMDP2_987H7C794Negative1022234 - 102424674549.7
acyl-phosphate:glycerol-3-phosphate o-acyltransferase plsyLRHMDP2_988B3WEB1Positive1024498 - 102512122637.4
lacx protein plasmidLRHMDP2_989Not AvailableNegative1025202 - 102608032634.8
atp-dependent hsl protease atp-binding subunit hsluLRHMDP2_990Q88W26Negative1026120 - 102752952193.0

Displaying genes 1081 – 1090 of 1313 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

234 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000400(R)-10-hydroxyoctadecanoateC18H35O3Chemical structure of (R)-10-hydroxyoctadecanoateNot available
Average299.476Da
Monoisotopic299.2591686Da
BASm0000503L-rhamnoseC6H12O5Chemical structure of L-rhamnose3615-41-6
Average164.1565Da
Monoisotopic164.0684735Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da

Displaying 1–10 of 234 metabolites

Health Effects

No health effects information available for this bacterium.