Helicobacter pylori UMB_G1

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori UMB_G1 is a Gram-negative bacterium characterized by its spirilla shape and microaerophilic oxygen requirement. It is associated with host environments, specifically the gastric mucosa of mammals, where it establishes a biotic relationship that is free-living. This bacterium demonstrates a distinct cell arrangement as singles and possesses flagella, which aids in its motility despite being noted as non-mobile in this context. The optimal growth temperature for Helicobacter pylori UMB_G1 is 37°C, aligning with the mesophilic temperature range where it thrives best. Additionally, this organism features a unique structural composition, having a single replicon and two membranes. The presence of flagella suggests an evolutionary adaptation that may play a role in colonization and persistence within the host environment. As a microaerophilic organism, Helicobacter pylori UMB_G1 requires specific oxygen levels lower than those found in the atmosphere, which reflects its specialized niche in the gastric environment. The ecological insight derived from these traits indicates that Helicobacter pylori UMB_G1 has evolved to occupy a specific habitat, where its physiological and structural characteristics allow it to survive and potentially influence host health. Understanding these traits can provide valuable insights into the dynamics of host-microbe interactions, particularly in relation to gastric diseases. The accession number for this strain is AOTV00000000.1, which can be used for further studies and comparisons in microbial databases.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainUMB_G1

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori UMB_G1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori UMB_G1 HPMALT.contig.4, whole genome shotgun

Gene Summary

Adenine Count

475196 bp

Thymine Count

479756 bp

Guanine Count

306369 bp

Cytosine Count

310480 bp

Genome Length

1571801 bp

Protein-coding Genes

1560 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
catalaseA607_1555Not AvailableNegative1508222 - 150973958626.1
tonb-dependent receptor plug domain proteinA607_1556Not AvailablePositive1510061 - 151243688403.0
crossover junction endodeoxyribonuclease ruvcA607_1557Not AvailableNegative1512437 - 151291017455.5
nyn domain proteinA607_1558Not AvailablePositive1513041 - 151377228444.0
hypothetical proteinA607_1559Not AvailableNegative1514969 - 151555622493.6
holliday junction dna helicase ruvaA607_1560Not AvailableNegative1515864 - 151641520229.2
hypothetical proteinA607_1561Not AvailableNegative1516440 - 151828470872.9
integral membrane protein mvinA607_1562Not AvailablePositive1518377 - 151983754494.7
cysteine--trna ligaseA607_1563Not AvailablePositive1519838 - 152123553106.7
vacuolating cytotoxin autotransporterA607_1564Not AvailablePositive1521458 - 1525399142453.0

Displaying genes 1551 – 1560 of 1604 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.