Pseudomonas fluorescens ICMP 11288

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens ICMP 11288 is a Gram-negative, rod-shaped bacterium that thrives in diverse habitats. As a heterotrophic organism, it derives its energy from organic compounds, making it an adaptable species in various ecological niches. This bacterium is classified as an aerobe, requiring oxygen for its metabolic processes. One notable characteristic of Pseudomonas fluorescens ICMP 11288 is its mobility, facilitated by the presence of flagella. This motility enables the bacterium to navigate its environment effectively, which may contribute to its survival and competitive advantage in diverse ecosystems. The organism typically exists as single cells, reflecting a common arrangement among bacteria in this genus. Pseudomonas fluorescens ICMP 11288 is mesophilic, with an optimal growth temperature of 25°C, indicating its preference for moderate temperatures. It has a single replicon and is characterized by having two membranes, a trait common among Gram-negative bacteria. As a free-living organism, Pseudomonas fluorescens ICMP 11288 plays a significant role in various biological and ecological processes. Its ability to thrive in multiple habitats and utilize a variety of organic compounds highlights its potential contribution to nutrient cycling and soil health. Understanding the traits of this bacterium can provide insights into its ecological importance and its potential applications in bioremediation and agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
StrainICMP 11288

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens ICMP 11288
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas fluorescens ICMP 11288 scaffold99, whole genome

Gene Summary

Adenine Count

1282366 bp

Thymine Count

1314248 bp

Guanine Count

1988752 bp

Cytosine Count

1937688 bp

Genome Length

6523157 bp

Protein-coding Genes

5664 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Virion proteinAO063_21200Not AvailablePositive957267 - 95777018373.1
Hypothetical proteinAO063_21205Not AvailablePositive957788 - 95815913406.3
Hypothetical proteinAO063_21210Not AvailablePositive958156 - 95875221082.0
Hypothetical proteinAO063_21215Not AvailablePositive958749 - 95916514746.6
Tail constituent proteinAO063_21220Not AvailablePositive959238 - 95989422782.9
Hypothetical proteinAO063_21225Not AvailablePositive959898 - 96027813956.4
Hypothetical proteinAO063_21230Not AvailablePositive960326 - 96059810007.0
Putative tail component proteinAO063_21235O64330Positive960626 - 963685106790.0
Minor tail protein mAO063_21240Not AvailablePositive963685 - 96402312623.0
Minor tail protein lAO063_21245O64332Positive964035 - 96478727454.8

Displaying genes 51 – 60 of 5793 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

360 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002583-(carbamoylamino)propanoateC4H7N2O3Chemical structure of 3-(carbamoylamino)propanoateNot available
Average131.112Da
Monoisotopic131.046215673Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000305tetrathionateO6S4Chemical structure of tetrathionateNot available
Average224.24Da
Monoisotopic223.8588696Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 360 metabolites

Health Effects

No health effects information available for this bacterium.