Cycloclasticus zancles 78-ME

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Cycloclasticus

Description

Cycloclasticus zancles 78-ME is characterized by having two replicons, which are essential for its genetic makeup and functionality. The organism is cataloged in the National Center for Biotechnology Information (NCBI) with two specific accessions: NC_021917.1 and NC_021918.1. These accessions provide a basis for further genomic studies and comparisons with other microbial species. The presence of two replicons suggests a complex genetic architecture that may contribute to its adaptability and survival in various environments. This trait is often associated with organisms that exhibit significant metabolic versatility, enabling them to thrive in diverse ecological niches. From an ecological perspective, Cycloclasticus zancles 78-ME is known for its role in the degradation of aromatic hydrocarbons, which positions it as an important player in bioremediation processes. Its ability to break down these compounds can help mitigate the impact of pollution in marine environments, highlighting its potential utility in environmental management. Understanding the genomic features and ecological roles of Cycloclasticus zancles 78-ME can provide insights into microbial ecology and the mechanisms through which certain bacteria contribute to ecosystem health and restoration.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusCycloclasticus
SpeciesCycloclasticus zancles
Strain78-ME

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cycloclasticus zancles 78-ME plasmid p7ME01, complete sequence.

Gene Summary

Adenine Count

9310 bp

Thymine Count

10477 bp

Guanine Count

10848 bp

Cytosine Count

11712 bp

Genome Length

42347 bp

Protein-coding Genes

50 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipoyl synthaseCYCME_RS03430Not AvailableNegative699192 - 70016636187.4
lipoyl(octanoyl) transferase lipbCYCME_RS03435Not AvailableNegative700171 - 70075821347.0
ybed family proteinCYCME_RS03440Not AvailableNegative700839 - 70112010555.5
d-amino acid aminotransferaseCYCME_RS03445Not AvailableNegative701122 - 70198832054.2
d-alanyl-d-alanine carboxypeptidase family proteinCYCME_RS03450Not AvailableNegative701997 - 70312141437.2
septal ring lytic transglycosylase rlpa family proteinCYCME_RS03455Not AvailableNegative703218 - 70407531555.8
lytic murein transglycosylase bCYCME_RS03460Not AvailableNegative704072 - 70508538568.9
rod shape-determining protein rodaCYCME_RS03465Not AvailableNegative705095 - 70623141581.2
penicillin-binding protein 2CYCME_RS03470Not AvailableNegative706228 - 70805768304.0
rod shape-determining protein mredCYCME_RS03475Not AvailableNegative708064 - 70854918277.8

Displaying genes 741 – 750 of 2572 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.