Cycloclasticus zancles 78-ME

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Cycloclasticus

Description

Cycloclasticus zancles 78-ME is characterized by having two replicons, which are essential for its genetic makeup and functionality. The organism is cataloged in the National Center for Biotechnology Information (NCBI) with two specific accessions: NC_021917.1 and NC_021918.1. These accessions provide a basis for further genomic studies and comparisons with other microbial species. The presence of two replicons suggests a complex genetic architecture that may contribute to its adaptability and survival in various environments. This trait is often associated with organisms that exhibit significant metabolic versatility, enabling them to thrive in diverse ecological niches. From an ecological perspective, Cycloclasticus zancles 78-ME is known for its role in the degradation of aromatic hydrocarbons, which positions it as an important player in bioremediation processes. Its ability to break down these compounds can help mitigate the impact of pollution in marine environments, highlighting its potential utility in environmental management. Understanding the genomic features and ecological roles of Cycloclasticus zancles 78-ME can provide insights into microbial ecology and the mechanisms through which certain bacteria contribute to ecosystem health and restoration.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusCycloclasticus
SpeciesCycloclasticus zancles
Strain78-ME

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cycloclasticus zancles 78-ME plasmid p7ME01, complete sequence.

Gene Summary

Adenine Count

9310 bp

Thymine Count

10477 bp

Guanine Count

10848 bp

Cytosine Count

11712 bp

Genome Length

42347 bp

Protein-coding Genes

50 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna topoisomerase iiiCYCME_RS12705Not AvailableNegative24982 - 2704275665.7
conjugative transfer signal peptidase trafCYCME_RS12710Not AvailableNegative27057 - 2759319028.8
type iv secretory system conjugative dna transfer family proteinCYCME_RS12715Not AvailableNegative27590 - 2949769845.6
trai/moba(p) family conjugative relaxaseCYCME_RS12720Not AvailableNegative29494 - 3178284445.0
conjugal transfer transcriptional regulator trajCYCME_RS12725Not AvailableNegative31814 - 3220314471.6
trak family proteinCYCME_RS12730Not AvailablePositive32546 - 3297116046.0
arsa-related p-loop atpaseCYCME_RS12735Not AvailablePositive32971 - 3369626618.0
conjugal transfer protein tramCYCME_RS12740Not AvailablePositive33696 - 3413315745.8
phosphoribosyltransferaseCYCME_RS12745Not AvailableNegative34184 - 3542845501.1
incp plasmid survival protein kfrbCYCME_RS12750Not AvailableNegative35534 - 3587812586.1

Displaying genes 31 – 40 of 2572 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.