Cycloclasticus zancles 78-ME

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Cycloclasticus

Description

Cycloclasticus zancles 78-ME is characterized by having two replicons, which are essential for its genetic makeup and functionality. The organism is cataloged in the National Center for Biotechnology Information (NCBI) with two specific accessions: NC_021917.1 and NC_021918.1. These accessions provide a basis for further genomic studies and comparisons with other microbial species. The presence of two replicons suggests a complex genetic architecture that may contribute to its adaptability and survival in various environments. This trait is often associated with organisms that exhibit significant metabolic versatility, enabling them to thrive in diverse ecological niches. From an ecological perspective, Cycloclasticus zancles 78-ME is known for its role in the degradation of aromatic hydrocarbons, which positions it as an important player in bioremediation processes. Its ability to break down these compounds can help mitigate the impact of pollution in marine environments, highlighting its potential utility in environmental management. Understanding the genomic features and ecological roles of Cycloclasticus zancles 78-ME can provide insights into microbial ecology and the mechanisms through which certain bacteria contribute to ecosystem health and restoration.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusCycloclasticus
SpeciesCycloclasticus zancles
Strain78-ME

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cycloclasticus zancles 78-ME plasmid p7ME01, complete sequence.

Gene Summary

Adenine Count

9310 bp

Thymine Count

10477 bp

Guanine Count

10848 bp

Cytosine Count

11712 bp

Genome Length

42347 bp

Protein-coding Genes

50 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sodium ion-translocating decarboxylase subunit betaCYCME_RS09070Not AvailableNegative1881567 - 188270038860.2
sodium-extruding oxaloacetate decarboxylase subunit alphaCYCME_RS09075Not AvailableNegative1882713 - 188450665053.9
oadg family proteinCYCME_RS09080Not AvailableNegative1884518 - 18847488361.44
flagellar export protein flijCYCME_RS09085Not AvailableNegative1884832 - 188527217012.3
flagellar protein export atpase fliiCYCME_RS09090Not AvailableNegative1885282 - 188666750099.3
flagellar assembly protein flihCYCME_RS09095Not AvailableNegative1886664 - 188729622732.9
flagellar motor switch protein fligCYCME_RS09100Not AvailableNegative1887289 - 188830836204.4
flagellar basal-body ms-ring/collar protein flifCYCME_RS09105Not AvailableNegative1888308 - 188997259098.9
flagellar hook-basal body complex protein flieCYCME_RS09110Not AvailableNegative1890021 - 189033811475.7
sigma-54-dependent transcriptional regulatorCYCME_RS09115Not AvailableNegative1890378 - 189172149288.7

Displaying genes 1881 – 1890 of 2572 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.