Cycloclasticus zancles 78-ME

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Cycloclasticus

Description

Cycloclasticus zancles 78-ME is characterized by having two replicons, which are essential for its genetic makeup and functionality. The organism is cataloged in the National Center for Biotechnology Information (NCBI) with two specific accessions: NC_021917.1 and NC_021918.1. These accessions provide a basis for further genomic studies and comparisons with other microbial species. The presence of two replicons suggests a complex genetic architecture that may contribute to its adaptability and survival in various environments. This trait is often associated with organisms that exhibit significant metabolic versatility, enabling them to thrive in diverse ecological niches. From an ecological perspective, Cycloclasticus zancles 78-ME is known for its role in the degradation of aromatic hydrocarbons, which positions it as an important player in bioremediation processes. Its ability to break down these compounds can help mitigate the impact of pollution in marine environments, highlighting its potential utility in environmental management. Understanding the genomic features and ecological roles of Cycloclasticus zancles 78-ME can provide insights into microbial ecology and the mechanisms through which certain bacteria contribute to ecosystem health and restoration.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusCycloclasticus
SpeciesCycloclasticus zancles
Strain78-ME

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cycloclasticus zancles 78-ME plasmid p7ME01, complete sequence.

Gene Summary

Adenine Count

9310 bp

Thymine Count

10477 bp

Guanine Count

10848 bp

Cytosine Count

11712 bp

Genome Length

42347 bp

Protein-coding Genes

50 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
threonine--trna ligaseCYCME_RS08825Not AvailableNegative1833510 - 183542972721.5
Trna-valNot AvailableNot AvailablePositive1835474 - 1835550Not Available
excinuclease abc subunit uvrbCYCME_RS08835Not AvailableNegative1835633 - 183763376050.5
pyridoxal phosphate-dependent aminotransferaseCYCME_RS08840Not AvailablePositive1837760 - 183895042748.0
Trna-asnNot AvailableNot AvailablePositive1839020 - 1839095Not Available
hypothetical proteinCYCME_RS08850Not AvailableNegative1839372 - 184018430722.4
hypothetical proteinCYCME_RS08855Not AvailableNegative1840216 - 184077922018.1
hypothetical proteinCYCME_RS08860Not AvailableNegative1840878 - 18411269650.46
abc transporter transmembrane domain-containing proteinCYCME_RS08865Not AvailableNegative1841313 - 184310664588.6
zinc ribbon-containing proteinCYCME_RS08870Not AvailableNegative1843288 - 184383020272.3

Displaying genes 1831 – 1840 of 2572 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.