Cycloclasticus zancles 78-ME

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Piscirickettsiaceae

Genus

Cycloclasticus

Description

Cycloclasticus zancles 78-ME is characterized by having two replicons, which are essential for its genetic makeup and functionality. The organism is cataloged in the National Center for Biotechnology Information (NCBI) with two specific accessions: NC_021917.1 and NC_021918.1. These accessions provide a basis for further genomic studies and comparisons with other microbial species. The presence of two replicons suggests a complex genetic architecture that may contribute to its adaptability and survival in various environments. This trait is often associated with organisms that exhibit significant metabolic versatility, enabling them to thrive in diverse ecological niches. From an ecological perspective, Cycloclasticus zancles 78-ME is known for its role in the degradation of aromatic hydrocarbons, which positions it as an important player in bioremediation processes. Its ability to break down these compounds can help mitigate the impact of pollution in marine environments, highlighting its potential utility in environmental management. Understanding the genomic features and ecological roles of Cycloclasticus zancles 78-ME can provide insights into microbial ecology and the mechanisms through which certain bacteria contribute to ecosystem health and restoration.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyPiscirickettsiaceae
GenusCycloclasticus
SpeciesCycloclasticus zancles
Strain78-ME

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Cycloclasticus zancles 78-ME plasmid p7ME01, complete sequence.

Gene Summary

Adenine Count

9310 bp

Thymine Count

10477 bp

Guanine Count

10848 bp

Cytosine Count

11712 bp

Genome Length

42347 bp

Protein-coding Genes

50 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aromatic-ring-hydroxylating dioxygenase subunit betaCYCME_RS07870Not AvailableNegative1628171 - 162870721104.0
aromatic ring-hydroxylating oxygenase subunit alphaCYCME_RS07875Not AvailableNegative1628709 - 163003749665.7
hydroxylamine reductaseCYCME_RS07880Not AvailableNegative1630323 - 163199360172.7
crp/fnr family transcriptional regulatorCYCME_RS07885Not AvailablePositive1632083 - 163275125341.8
nad(p)-dependent oxidoreductaseCYCME_RS07890Not AvailableNegative1632778 - 163367431822.7
sdr family nad(p)-dependent oxidoreductaseCYCME_RS07895Not AvailableNegative1633880 - 163464126530.6
efflux rnd transporter permease subunitCYCME_RS07900Not AvailableNegative1634716 - 163709187020.1
hypothetical proteinCYCME_RS07905Not AvailableNegative1637084 - 163820241027.9
non-heme iron oxygenase ferredoxin subunitCYCME_RS07910Not AvailableNegative1638692 - 163901811982.4
alpha/beta fold hydrolaseCYCME_RS07915Not AvailableNegative1639095 - 163993130737.6

Displaying genes 1641 – 1650 of 2572 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.