Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | DOT-T1E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1201150 bp
Thymine Count
1213598 bp
Guanine Count
1930834 bp
Cytosine Count
1915115 bp
Genome Length
6260702 bp
Protein-coding Genes
5695 genes
Non-Coding Genes
158 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic-ring-hydroxylating dioxygenase subunit beta | T1E_RS21670 | Not Available | Positive | 4643251 - 4643814 | 22014.0 |
| non-heme iron oxygenase ferredoxin subunit | T1E_RS21675 | Not Available | Positive | 4643823 - 4644146 | 11890.2 |
| nad(p)/fad-dependent oxidoreductase | T1E_RS21680 | Not Available | Positive | 4644146 - 4645378 | 42944.6 |
| cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | T1E_RS21685 | Not Available | Positive | 4645375 - 4646202 | 28783.6 |
| biphenyl-2,3-diol 1,2-dioxygenase | T1E_RS21690 | Not Available | Positive | 4646218 - 4647093 | 32211.0 |
| toluene degradation hydratase todj | T1E_RS21695 | Not Available | Positive | 4647215 - 4648021 | 28241.1 |
| acetaldehyde dehydrogenase (acetylating) | T1E_RS21700 | Not Available | Positive | 4648129 - 4649079 | 33686.9 |
| 4-hydroxy-2-oxovalerate aldolase | T1E_RS21705 | Not Available | Positive | 4649090 - 4650148 | 38476.0 |
| atp-binding protein | T1E_RS21710 | Not Available | Positive | 4650329 - 4651582 | 46288.6 |
| pas domain s-box protein | T1E_RS21715 | Not Available | Positive | 4651527 - 4653299 | 64610.5 |
Health Effects
No health effects information available for this bacterium.






