Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | DOT-T1E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1201150 bp
Thymine Count
1213598 bp
Guanine Count
1930834 bp
Cytosine Count
1915115 bp
Genome Length
6260702 bp
Protein-coding Genes
5695 genes
Non-Coding Genes
158 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mdta/muxa family multidrug efflux rnd transporter periplasmic adaptor subunit | T1E_RS11635 | Not Available | Positive | 2485622 - 2486929 | 46638.6 |
| mdtb/muxb family multidrug efflux rnd transporter permease subunit | T1E_RS11640 | Not Available | Positive | 2486926 - 2490024 | 111497.0 |
| efflux rnd transporter permease subunit | T1E_RS11645 | Not Available | Positive | 2490021 - 2493128 | 112309.0 |
| efflux transporter outer membrane subunit | T1E_RS11650 | Not Available | Positive | 2493125 - 2494615 | 53927.3 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | T1E_RS11655 | Not Available | Positive | 2494746 - 2496833 | 74688.0 |
| duf1652 domain-containing protein | T1E_RS11660 | Not Available | Negative | 2496885 - 2497145 | 9428.54 |
| duf1345 domain-containing protein | T1E_RS11665 | Not Available | Negative | 2497420 - 2498067 | 23219.3 |
| phosphoglucomutase (alpha-d-glucose-1,6-bisphosphate-dependent) | T1E_RS11670 | Not Available | Positive | 2498241 - 2499878 | 58606.4 |
| sigma-70 family rna polymerase sigma factor | T1E_RS11675 | Not Available | Positive | 2499957 - 2500469 | 19551.6 |
| fecr domain-containing protein | T1E_RS11680 | Not Available | Positive | 2500466 - 2501410 | 34314.5 |
Health Effects
No health effects information available for this bacterium.






