Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | DOT-T1E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1201150 bp
Thymine Count
1213598 bp
Guanine Count
1930834 bp
Cytosine Count
1915115 bp
Genome Length
6260702 bp
Protein-coding Genes
5695 genes
Non-Coding Genes
158 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ureidoglycolate lyase | T1E_RS00415 | Not Available | Negative | 92574 - 93077 | 18769.5 |
| 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | T1E_RS00420 | Not Available | Negative | 93127 - 93642 | 18999.5 |
| allantoinase puue | T1E_RS00425 | Not Available | Negative | 93642 - 94568 | 35360.8 |
| hydroxyisourate hydrolase | T1E_RS00430 | Not Available | Positive | 94970 - 95323 | 12995.3 |
| retention module-containing protein | T1E_RS00435 | Not Available | Negative | 95365 - 96456 | 36156.2 |
| type i secretion system permease/atpase | T1E_RS00445 | Not Available | Positive | 97454 - 99610 | 78588.6 |
| hlyd family type i secretion periplasmic adaptor subunit | T1E_RS00450 | Not Available | Positive | 99618 - 100976 | 50311.9 |
| cyclic di-gmp receptor lapd | T1E_RS00455 | Not Available | Negative | 101132 - 103078 | 71290.3 |
| cysteine protease lapg | T1E_RS00460 | Not Available | Negative | 103089 - 103850 | 28354.1 |
| gntr family transcriptional regulator | T1E_RS00465 | Not Available | Positive | 104054 - 104743 | 25536.0 |
Health Effects
No health effects information available for this bacterium.






