Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | DOT-T1E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1201150 bp
Thymine Count
1213598 bp
Guanine Count
1930834 bp
Cytosine Count
1915115 bp
Genome Length
6260702 bp
Protein-coding Genes
5695 genes
Non-Coding Genes
158 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbe | T1E_RS05285 | Not Available | Negative | 1159239 - 1161722 | 90952.5 |
| virb3 family type iv secretion system protein | T1E_RS05290 | Not Available | Negative | 1161735 - 1162007 | 9580.86 |
| trbc/virb2 family protein | T1E_RS05295 | Not Available | Negative | 1162004 - 1162387 | 13228.4 |
| p-type conjugative transfer atpase trbb | T1E_RS05300 | Not Available | Negative | 1162384 - 1163463 | 38103.4 |
| ribbon-helix-helix protein, copg family | T1E_RS05305 | Not Available | Negative | 1163460 - 1163948 | 18293.8 |
| conjugal transfer protein trag | T1E_RS05310 | Not Available | Negative | 1163945 - 1165948 | 72953.0 |
| eexn family lipoprotein | T1E_RS05315 | Not Available | Negative | 1166180 - 1166443 | 9483.46 |
| lysr family transcriptional regulator | T1E_RS05320 | Not Available | Negative | 1166440 - 1167384 | 34681.9 |
| ybak/ebsc family protein | T1E_RS05325 | Not Available | Negative | 1167525 - 1167992 | 16609.1 |
| 2-isopropylmalate synthase | T1E_RS05330 | Not Available | Negative | 1168216 - 1169892 | 61301.3 |
Health Effects
No health effects information available for this bacterium.






