Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas putida |
| Strain | DOT-T1E |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Soil - Wastewater |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1201150 bp
Thymine Count
1213598 bp
Guanine Count
1930834 bp
Cytosine Count
1915115 bp
Genome Length
6260702 bp
Protein-coding Genes
5695 genes
Non-Coding Genes
158 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine oxidase thio | T1E_RS04485 | Not Available | Positive | 985969 - 987066 | 38655.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | T1E_RS04495 | Not Available | Negative | 987519 - 988889 | 48966.3 |
| membrane protein insertase yidc | T1E_RS04500 | Not Available | Negative | 988978 - 990660 | 61923.1 |
| membrane protein insertion efficiency factor yidd | T1E_RS04505 | Not Available | Negative | 990663 - 990908 | 9198.05 |
| ribonuclease p protein component | T1E_RS04510 | Not Available | Negative | 990901 - 991305 | 15022.5 |
| 50s ribosomal protein l34 | T1E_RS04515 | Not Available | Negative | 991319 - 991453 | 5138.49 |
| chromosomal replication initiator protein dnaa | T1E_RS04520 | Not Available | Positive | 992048 - 993565 | 56419.6 |
| dna polymerase iii subunit beta | T1E_RS04525 | Not Available | Positive | 993606 - 994709 | 40721.2 |
| dna replication/repair protein recf | T1E_RS04530 | Not Available | Positive | 994725 - 995828 | 41797.2 |
| dna topoisomerase (atp-hydrolyzing) subunit b | T1E_RS04535 | Not Available | Positive | 995833 - 998253 | 90036.0 |
Health Effects
No health effects information available for this bacterium.






