Rubrivirga marina str. SAORIC-28

Kingdom

Pseudomonadati

Phylum

Rhodothermota

Class

Rhodothermia

Order

Rhodothermales

Family

Rubricoccaceae

Genus

Rubrivirga

Description

Rubrivirga marina str. SAORIC-28 is a marine bacterium characterized by having a single replicon. This trait indicates that its genomic structure is likely organized into a single circular chromosome, which is typical for many bacterial species. The organism is cataloged under the accession number MQWD00000000.1, which allows for its genetic information to be accessed and studied in databases. The classification of Rubrivirga marina suggests that it is part of a broader group of bacteria that inhabit marine environments. While specific ecological roles are not detailed, marine bacteria generally play critical roles in nutrient cycling, organic matter degradation, and the overall health of marine ecosystems. The presence of Rubrivirga marina in marine habitats may indicate its involvement in these essential processes. The single-replicon structure may confer certain advantages, such as streamlined replication and maintenance of genetic integrity, which could be beneficial in the dynamic and competitive marine environment. Understanding the genomic characteristics of Rubrivirga marina str. SAORIC-28 could provide insights into its evolutionary adaptations and functional capabilities in marine ecosystems. Further research is warranted to explore its ecological roles and interactions within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumRhodothermota
ClassRhodothermia
OrderRhodothermales
FamilyRubricoccaceae
GenusRubrivirga
SpeciesRubrivirga marina
StrainSAORIC-28

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rubrivirga marina strain SAORIC-28 scaffold13_cov203_read148,

Gene Summary

Adenine Count

685458 bp

Thymine Count

685562 bp

Guanine Count

1796169 bp

Cytosine Count

1810553 bp

Genome Length

4981075 bp

Protein-coding Genes

4172 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
short-chain dehydrogenaseBSZ37_20900Not AvailablePositive4851626 - 485237525288.1
hypothetical proteinBSZ37_20905Not AvailablePositive4852372 - 485312726167.5
cyclopropane-fatty-acyl-phospholipid synthaseBSZ37_20910Not AvailablePositive4853223 - 485439544012.5
copper-translocating p-type atpaseBSZ37_20915Not AvailablePositive4854615 - 485663371371.8
hypothetical proteinBSZ37_20925Not AvailablePositive4857909 - 485845718766.5
hypothetical proteinBSZ37_20930Not AvailablePositive4858522 - 485985946468.1
hypothetical proteinBSZ37_20935Not AvailablePositive4859928 - 486082431401.9
duf2933 domain-containing proteinBSZ37_20940Not AvailablePositive4860808 - 48609966756.93
hypothetical proteinBSZ37_20945Not AvailablePositive4861037 - 486135111499.1
zinc abc transporterBSZ37_20950Not AvailablePositive4861404 - 486244136857.9

Displaying genes 4121 – 4130 of 4225 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.