Pseudomonas syringae pv. actinidiae ICMP 19096

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. actinidiae ICMP 19096 is a Gram-negative, mesophilic bacterium characterized by its rod shape and aerobic metabolism. It is a heterotroph, relying on organic compounds for energy, and exhibits mobility due to the presence of flagella. The organism is typically found as free-living, indicating that it does not form symbiotic relationships with other organisms. This bacterium has a single replicon and features a double membrane structure, which is characteristic of Gram-negative bacteria. Its ability to thrive in multiple habitats suggests a versatile ecological role and adaptability to various environmental conditions. The presence of flagella not only contributes to its mobility but may also play a role in its interaction with plant hosts, as P. syringae is known to be a plant pathogen. Understanding the traits of this bacterium, particularly its heterotrophic nature and free-living lifestyle, can provide insights into its ecological interactions and potential impact on agricultural systems, especially concerning its relationship with kiwifruit crops, as P. syringae pv. actinidiae is known to cause significant disease in these plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
Strainpv. actinidiae ICMP 19096

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. actinidiae ICMP 19096
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. actinidiae ICMP 19096 scaffold4078, whole

Gene Summary

Adenine Count

1283892 bp

Thymine Count

1241884 bp

Guanine Count

1744609 bp

Cytosine Count

1801946 bp

Genome Length

6080067 bp

Protein-coding Genes

7967 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
recombination regulator recxA245_00321Not AvailableNegative45867 - 4620913068.5
recombinase aA245_00326Not AvailableNegative46320 - 4666312223.6
recombinase aA245_00331Not AvailableNegative46664 - 4741726589.4
hypothetical proteinA245_00336Not AvailablePositive47499 - 476967364.03
cina domain proteinA245_00341Not AvailableNegative47641 - 479229411.16
dna mismatch repair protein mutsA245_00346Not AvailablePositive48426 - 4915326996.5
dna mismatch repair protein mutsA245_00351Not AvailablePositive49154 - 4981825070.0
dna mismatch repair protein mutsA245_00366Not AvailablePositive50558 - 506904920.98
4fe-4s ferredoxinA245_00371Not AvailablePositive50938 - 5126112040.2
rna polymerase sigma factor rposA245_00376Not AvailableNegative51801 - 5280838116.5

Displaying genes 61 – 70 of 8018 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.