Pseudomonas syringae pv. actinidiae ICMP 19096

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. actinidiae ICMP 19096 is a Gram-negative, mesophilic bacterium characterized by its rod shape and aerobic metabolism. It is a heterotroph, relying on organic compounds for energy, and exhibits mobility due to the presence of flagella. The organism is typically found as free-living, indicating that it does not form symbiotic relationships with other organisms. This bacterium has a single replicon and features a double membrane structure, which is characteristic of Gram-negative bacteria. Its ability to thrive in multiple habitats suggests a versatile ecological role and adaptability to various environmental conditions. The presence of flagella not only contributes to its mobility but may also play a role in its interaction with plant hosts, as P. syringae is known to be a plant pathogen. Understanding the traits of this bacterium, particularly its heterotrophic nature and free-living lifestyle, can provide insights into its ecological interactions and potential impact on agricultural systems, especially concerning its relationship with kiwifruit crops, as P. syringae pv. actinidiae is known to cause significant disease in these plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
Strainpv. actinidiae ICMP 19096

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. actinidiae ICMP 19096
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. actinidiae ICMP 19096 scaffold4078, whole

Gene Summary

Adenine Count

1283892 bp

Thymine Count

1241884 bp

Guanine Count

1744609 bp

Cytosine Count

1801946 bp

Genome Length

6080067 bp

Protein-coding Genes

7967 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glucosamine--fructose-6-phosphate aminotransferaseA245_37009Not AvailableNegative4630779 - 463188040305.4
deor family transcriptional regulatorA245_37014Not AvailableNegative4631891 - 463265828141.8
udp-n-acetylglucosamine pyrophosphorylaseA245_37019Not AvailableNegative4633111 - 463395830077.7
udp-n-acetylglucosamine pyrophosphorylaseA245_37024Not AvailableNegative4633959 - 463446718189.0
f0f1 atp synthase subunit epsilonA245_37029Not AvailableNegative4634638 - 463506314761.8
f0f1 atp synthase subunit betaA245_37034Not AvailableNegative4635108 - 463648749495.2
f0f1 atp synthase subunit gammaA245_37039Not AvailableNegative4636515 - 463737531380.1
f0f1 atp synthase subunit alphaA245_37044Not AvailableNegative4637426 - 463897055327.4
f0f1 atp synthase subunit deltaA245_37049Not AvailableNegative4638992 - 463952819342.2
f0f1 atp synthase subunit bA245_37054Not AvailableNegative4639541 - 464001116972.4

Displaying genes 6101 – 6110 of 8018 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.