Pseudomonas syringae pv. actinidiae ICMP 19096

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. actinidiae ICMP 19096 is a Gram-negative, mesophilic bacterium characterized by its rod shape and aerobic metabolism. It is a heterotroph, relying on organic compounds for energy, and exhibits mobility due to the presence of flagella. The organism is typically found as free-living, indicating that it does not form symbiotic relationships with other organisms. This bacterium has a single replicon and features a double membrane structure, which is characteristic of Gram-negative bacteria. Its ability to thrive in multiple habitats suggests a versatile ecological role and adaptability to various environmental conditions. The presence of flagella not only contributes to its mobility but may also play a role in its interaction with plant hosts, as P. syringae is known to be a plant pathogen. Understanding the traits of this bacterium, particularly its heterotrophic nature and free-living lifestyle, can provide insights into its ecological interactions and potential impact on agricultural systems, especially concerning its relationship with kiwifruit crops, as P. syringae pv. actinidiae is known to cause significant disease in these plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
Strainpv. actinidiae ICMP 19096

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. actinidiae ICMP 19096
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. actinidiae ICMP 19096 scaffold4078, whole

Gene Summary

Adenine Count

1283892 bp

Thymine Count

1241884 bp

Guanine Count

1744609 bp

Cytosine Count

1801946 bp

Genome Length

6080067 bp

Protein-coding Genes

7967 genes

Non-Coding Genes

51 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent dna helicase recqA245_12810Not AvailableNegative1613673 - 16139029029.88
atp-dependent dna helicase recqA245_12815Not AvailableNegative1613903 - 16141439253.29
atp-dependent dna helicase recqA245_12820Not AvailableNegative1614144 - 161448212175.9
hypothetical proteinA245_12825Not AvailablePositive1614659 - 161524621902.6
hypothetical proteinA245_12830Not AvailablePositive1615257 - 161566115021.9
hypothetical proteinA245_12835Not AvailableNegative1615692 - 161716156889.9
bifunctional trna (mnm(5)s(2)u34)-methyltransferase/fad-dependent cmnm(5)s(2)u34 oxidoreductaseA245_12840Not AvailablePositive1617309 - 161787121513.5
bifunctional trna (mnm(5)s(2)u34)-methyltransferase/fad-dependent cmnm(5)s(2)u34 oxidoreductaseA245_12845Not AvailablePositive1618086 - 161889928886.2
bifunctional trna (mnm(5)s(2)u34)-methyltransferase/fad-dependent cmnm(5)s(2)u34 oxidoreductaseA245_12850Not AvailablePositive1618900 - 161923211852.3
abc transporter atp-binding proteinA245_12855Not AvailablePositive1619358 - 161977915618.9

Displaying genes 2101 – 2110 of 8018 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.