Helicobacter pylori FD506

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori FD506 is a Gram-negative, microaerophilic bacterium characterized by its spiral shape (spirilla) and single-cell arrangement. This organism is notable for its presence in host-associated environments, indicating a relationship with a specific biological host. It possesses two membranes, which is characteristic of Gram-negative bacteria, and it has a single replicon, suggesting a streamlined genetic structure. H. pylori FD506 is non-motile despite having flagella, which often contribute to bacterial mobility. The optimal growth temperature for this organism is 37°C, placing it within the mesophilic temperature range conducive to growth in warm-blooded hosts. In terms of its ecological role, H. pylori FD506 is described as free-living, indicating that it can exist independently within its host environment. This is significant because H. pylori is commonly associated with human gastric conditions, including gastritis and peptic ulcers, reflecting its ability to thrive in the acidic environment of the stomach. Understanding the specific traits of H. pylori FD506 contributes to our knowledge of its ecological niche and biotic relationships within a host. Its microaerophilic nature and mesophilic growth conditions suggest adaptations that allow it to survive in the unique gastric environment, highlighting the intricate interactions between microbial life and their hosts. The accession number for this strain is AKHO00000000.2, which can be referenced for further genetic and genomic information.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainFD506

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori FD506
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori FD506 contig99, whole genome shotgun sequence.

Gene Summary

Adenine Count

490407 bp

Thymine Count

499140 bp

Guanine Count

319042 bp

Cytosine Count

306652 bp

Genome Length

1615241 bp

Protein-coding Genes

1575 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosomal protein s12 methylthiotransferaseN404_02725Not AvailableNegative369493 - 37081249787.1
nicotinate phosphoribosyltransferaseN404_02730Not AvailableNegative370814 - 37127517638.3
aminotransferaseN404_02735Not AvailableNegative371284 - 37243842830.2
membrane proteinN404_02740Not AvailablePositive372542 - 37301816823.2
d-alanine--d-alanine ligaseN404_02745Not AvailablePositive373096 - 37413939713.1
2-hydroxy-6-oxohepta-2,4-dienoate hydrolaseN404_02750Not AvailablePositive374139 - 37486427598.5
udp-murnac-pentapeptide presynthetase murfN404_02755Not AvailablePositive374851 - 37633256033.9
hit family hydrolaseN404_02760Not AvailablePositive376342 - 37682718229.1
ribose-phosphate pyrophosphokinaseN404_02765Not AvailablePositive376892 - 37784834808.7
Trna-metNot AvailableNot AvailablePositive377885 - 377961Not Available

Displaying genes 391 – 400 of 1618 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.