Helicobacter pylori FD506

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori FD506 is a Gram-negative, microaerophilic bacterium characterized by its spiral shape (spirilla) and single-cell arrangement. This organism is notable for its presence in host-associated environments, indicating a relationship with a specific biological host. It possesses two membranes, which is characteristic of Gram-negative bacteria, and it has a single replicon, suggesting a streamlined genetic structure. H. pylori FD506 is non-motile despite having flagella, which often contribute to bacterial mobility. The optimal growth temperature for this organism is 37°C, placing it within the mesophilic temperature range conducive to growth in warm-blooded hosts. In terms of its ecological role, H. pylori FD506 is described as free-living, indicating that it can exist independently within its host environment. This is significant because H. pylori is commonly associated with human gastric conditions, including gastritis and peptic ulcers, reflecting its ability to thrive in the acidic environment of the stomach. Understanding the specific traits of H. pylori FD506 contributes to our knowledge of its ecological niche and biotic relationships within a host. Its microaerophilic nature and mesophilic growth conditions suggest adaptations that allow it to survive in the unique gastric environment, highlighting the intricate interactions between microbial life and their hosts. The accession number for this strain is AKHO00000000.2, which can be referenced for further genetic and genomic information.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainFD506

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori FD506
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Helicobacter pylori FD506 contig99, whole genome shotgun sequence.

Gene Summary

Adenine Count

490407 bp

Thymine Count

499140 bp

Guanine Count

319042 bp

Cytosine Count

306652 bp

Genome Length

1615241 bp

Protein-coding Genes

1575 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar motor switch protein flimN404_01580Not AvailablePositive165079 - 16614340214.1
flagellar motor switch protein fliyN404_01585Not AvailablePositive166147 - 16701031837.5
flagellar motor-switch proteinN404_01590Not AvailablePositive167038 - 16757420247.6
hypothetical proteinN404_01595Not AvailablePositive167571 - 16806819118.9
fur family transcriptional regulatorN404_01600Not AvailableNegative168076 - 16852517548.2
recombinase raraN404_01605Not AvailableNegative168686 - 16986143864.0
merr family transcriptional regulatorN404_01610Not AvailableNegative169858 - 17022914344.5
cobalamin abc transporter permeaseN404_01615Not AvailableNegative170239 - 17110532996.1
hypothetical proteinN404_01620Not AvailablePositive171273 - 17252346999.3
5'-3' exonucleaseN404_01625Not AvailableNegative172590 - 17342632749.8

Displaying genes 171 – 180 of 1618 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.