Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative large, multifunctional secreted protein | A33Q_0945 | Not Available | Negative | 936543 - 937304 | 28011.2 |
| hypothetical protein | A33Q_0946 | Not Available | Positive | 937568 - 938347 | 29314.9 |
| hypothetical protein | A33Q_0947 | Not Available | Negative | 938348 - 939388 | 38895.9 |
| hypothetical protein | A33Q_0948 | Not Available | Negative | 939382 - 940062 | 26939.6 |
| tonb-dependent receptor | A33Q_0949 | Not Available | Negative | 940201 - 943443 | 119811.0 |
| hypothetical protein | A33Q_0950 | Not Available | Positive | 943858 - 944538 | 26569.1 |
| hlyb/msba family abc transporter | A33Q_0951 | Not Available | Positive | 944528 - 946228 | 64441.4 |
| rnd efflux membrane fusion protein | A33Q_0952 | Not Available | Positive | 946240 - 947586 | 51160.0 |
| multidrug efflux protein, outer membrane component | A33Q_0953 | Not Available | Positive | 947596 - 948981 | 53391.5 |
| putative nadh-dependent dehydrogenase | A33Q_0954 | Not Available | Negative | 949190 - 950650 | 53916.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
