Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lycopene cyclase | A33Q_0925 | Not Available | Positive | 913033 - 914196 | 45069.1 |
| acetyl-coenzyme a carboxyl transferase alpha chain | A33Q_0926 | Not Available | Positive | 914416 - 915363 | 35605.3 |
| beta-lactamase-like protein | A33Q_0927 | Not Available | Positive | 915420 - 916283 | 33059.5 |
| hypothetical protein | A33Q_0928 | Not Available | Positive | 916273 - 917073 | 29465.9 |
| acyltransferase family protein | A33Q_0929 | Not Available | Positive | 917073 - 917633 | 20914.0 |
| hypothetical protein | A33Q_0930 | Not Available | Negative | 917634 - 917948 | 11640.0 |
| na(+) dependent transporter,sodium bile acid symporter family | A33Q_0931 | Not Available | Positive | 918371 - 919231 | 30767.4 |
| putative aminopeptidase | A33Q_0932 | Not Available | Negative | 919251 - 920732 | 54382.5 |
| trna pseudouridine synthase | A33Q_0933 | Not Available | Negative | 920822 - 921532 | 27075.1 |
| pp_00919 | A33Q_0934 | Not Available | Negative | 921583 - 922812 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
