Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein tran | A33Q_0917 | Not Available | Positive | 904495 - 905427 | 35103.9 |
| hypothetical protein | A33Q_0918 | Not Available | Positive | 905405 - 906196 | 30452.4 |
| hypothetical protein | A33Q_0919 | Not Available | Positive | 907019 - 907336 | 12350.8 |
| hypothetical protein | A33Q_0920 | Not Available | Positive | 907385 - 907813 | 16695.2 |
| tonb-dependent receptor | A33Q_0921 | Not Available | Positive | 907893 - 910085 | 82759.1 |
| Trna-asp | Not Available | Not Available | Positive | 911575 - 911655 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 911797 - 911873 | Not Available |
| hypothetical protein | A33Q_0922 | Not Available | Positive | 911906 - 912163 | 9974.02 |
| hypothetical protein | A33Q_0923 | Not Available | Negative | 912304 - 912438 | 5215.61 |
| hypothetical protein | A33Q_0924 | Not Available | Negative | 912671 - 912805 | 5239.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
