Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0897 | Not Available | Negative | 890095 - 890211 | 4564.72 |
| hypothetical protein | A33Q_0898 | Not Available | Positive | 890218 - 890661 | 17160.1 |
| hypothetical protein | A33Q_0899 | Not Available | Positive | 890702 - 891562 | 33807.4 |
| hypothetical protein | A33Q_0900 | Not Available | Positive | 891920 - 892039 | 4356.08 |
| hypothetical protein | A33Q_0901 | Not Available | Negative | 892339 - 892752 | 15938.9 |
| transcriptional regulatory protein rpry | A33Q_0902 | Not Available | Negative | 893109 - 893840 | 28320.4 |
| two-component system sensor histidine kinase | A33Q_0903 | Not Available | Negative | 893804 - 895183 | 52767.2 |
| hypothetical protein | A33Q_0904 | Not Available | Negative | 895352 - 895486 | 5007.04 |
| hypothetical protein | A33Q_0905 | Not Available | Positive | 895739 - 896059 | 12196.0 |
| conjugative transposon protein trae | A33Q_0906 | Not Available | Positive | 896063 - 896368 | 10517.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
