Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated helicase cas3 | A33Q_0877 | Not Available | Negative | 869603 - 871735 | 80130.4 |
| hypothetical protein | A33Q_0878 | Not Available | Negative | 871732 - 872292 | 21163.1 |
| crispr-associated protein, tm1814 family | A33Q_0879 | Not Available | Negative | 872298 - 872813 | 19364.3 |
| hypothetical protein | A33Q_0880 | Not Available | Negative | 873021 - 873203 | 7128.62 |
| hypothetical protein | A33Q_0881 | Not Available | Positive | 873273 - 873635 | 14189.9 |
| hypothetical protein | A33Q_0882 | Not Available | Positive | 873613 - 873792 | 7000.56 |
| crispr-associated protein cas6 | A33Q_0883 | Not Available | Negative | 873843 - 874634 | 30302.3 |
| hypothetical protein | A33Q_0884 | Not Available | Negative | 875621 - 876223 | 23573.1 |
| hypothetical protein | A33Q_0885 | Not Available | Negative | 876216 - 876383 | 6269.87 |
| hypothetical protein | A33Q_0886 | Not Available | Negative | 877109 - 877888 | 30840.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
