Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosylceramidase | A33Q_0865 | Not Available | Positive | 856748 - 858145 | 52378.1 |
| dna polymerase iii epsilon subunit | A33Q_0866 | Not Available | Negative | 858142 - 859506 | 51900.0 |
| putative hydrogenase | A33Q_0867 | Not Available | Positive | 859730 - 860902 | 44206.6 |
| nad(fad)-utilizing dehydrogenase | A33Q_0868 | Not Available | Negative | 860907 - 862487 | 57899.8 |
| tryptophan 2,3-dioxygenase | A33Q_0869 | Not Available | Negative | 862884 - 863849 | 38153.8 |
| glutaryl-coa dehydrogenase | A33Q_0870 | Not Available | Positive | 863968 - 865176 | 44667.7 |
| hypothetical protein | A33Q_0873 | Not Available | Negative | 865415 - 865567 | 5695.86 |
| hypothetical protein | A33Q_0874 | Not Available | Negative | 865618 - 867048 | 55094.1 |
| hypothetical protein | A33Q_0875 | Not Available | Negative | 867088 - 868038 | 35449.4 |
| hypothetical protein | A33Q_0876 | Not Available | Negative | 868222 - 869592 | 52500.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
