Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A33Q_0836 | Not Available | Negative | 834360 - 834482 | 4665.6 |
| pyridoxamine 5'-phosphate oxidase | A33Q_0837 | Not Available | Positive | 834519 - 835154 | 24405.8 |
| lmbe-related protein | A33Q_0838 | Not Available | Negative | 835166 - 835882 | 26814.9 |
| peptidase, m23/m37 family | A33Q_0839 | Not Available | Negative | 835901 - 836941 | 40001.2 |
| thioredoxin reductase | A33Q_0840 | Not Available | Negative | 836957 - 837895 | 33957.4 |
| rna polymerase sigma factor rpod | A33Q_0841 | Not Available | Negative | 838100 - 838963 | 32689.2 |
| polyribonucleotide nucleotidyltransferase | A33Q_0842 | Not Available | Negative | 839050 - 841191 | 78543.7 |
| ssu ribosomal protein s15p (s13e) | A33Q_0843 | Not Available | Negative | 841300 - 841575 | 10682.1 |
| membrane protein, putative | A33Q_0844 | Not Available | Negative | 841650 - 843473 | 69254.0 |
| hypothetical protein | A33Q_0845 | Not Available | Negative | 843549 - 843944 | 15433.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
