Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Indibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Indibacter |
| Species | Indibacter alkaliphilus |
| Strain | LW1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1522514 bp
Thymine Count
1515338 bp
Guanine Count
992787 bp
Cytosine Count
1005359 bp
Genome Length
5036047 bp
Protein-coding Genes
4656 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mota/tolq/exbb proton channel family protein | A33Q_0806 | Not Available | Positive | 798902 - 799591 | 24973.5 |
| biopolymer transport protein exbd/tolr | A33Q_0807 | Not Available | Positive | 799755 - 799985 | 8413.27 |
| ferric siderophore transport system, periplasmic binding protein tonb | A33Q_0808 | Not Available | Positive | 799985 - 800944 | 33919.8 |
| dihydrofolate synthase | A33Q_0809 | Not Available | Positive | 800964 - 802235 | 47182.9 |
| trna (guanine46-n7-)-methyltransferase | A33Q_0810 | Not Available | Positive | 802237 - 802899 | 25945.0 |
| dipeptidyl peptidase iv protein | A33Q_0811 | Not Available | Positive | 803038 - 805344 | 88552.3 |
| putative acetyltransferase | A33Q_0812 | Not Available | Negative | 805313 - 805720 | 15741.0 |
| hypothetical protein yaej with similarity to translation release factor | A33Q_0813 | Not Available | Positive | 806117 - 806551 | 16861.6 |
| sensor kinase of copper sensing two-component system | A33Q_0814 | Not Available | Positive | 806658 - 808505 | 70541.7 |
| tldd family protein | A33Q_0815 | Not Available | Positive | 808632 - 810275 | 59887.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
